A deep learning model for predicting efficient Cas12a guide sequences

A package for profiling alternative polyadenylation from RNA-seq data.

A package for simultaneous scanning of RNA sequences and secondary structures with sequence and secondary structure position frequency matrices.

A Shiny app that analyzes a Bike Share Toronto user’s ride data and produces various visualiations. (Demo)

A simple Shiny app for interactively creating custom colour bars. (Demo)

A package for visualizing alternative splicing events computed by VAST- TOOLS. (Demo)

During my internship at Microsoft Research, I developed an open-source .NET application written in C# that performs quality control assessment of high-throughput sequencing data.

A sequence database and website for the gene elastin. This was one of my earliest bioinformatics projects as an undergraduate co-op student in the Parkinson Lab. I updated the design and functionality of the website using PHP and enhanced the back-end PostgreSQL database with new data tables.